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<channel>
	<title>Publications</title>
	<link>http://cpima.stanford.edu/publications</link>
	<description>Just another Stanford.edu weblog</description>
	<pubDate>Thu, 22 Oct 2009 04:23:34 +0000</pubDate>
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			<item>
		<title>Publications for 2007</title>
		<link>http://cpima.stanford.edu/publications/2008/07/10/publications-for-2007-6/</link>
		<comments>http://cpima.stanford.edu/publications/2008/07/10/publications-for-2007-6/#comments</comments>
		<pubDate>Thu, 10 Jul 2008 17:41:35 +0000</pubDate>
		<dc:creator>Christine Cervantes</dc:creator>
		
		<category><![CDATA[Partially supported by CPIMA]]></category>

		<category><![CDATA[IRG 1]]></category>

		<guid isPermaLink="false">http://cpima.stanford.edu/publications/2008/07/10/publications-for-2007-6/</guid>
		<description><![CDATA[Myung, D., Koh, W., Bakri, A., et al; “Design and Fabrication of an Artificial Cornea Based on a Photolithographically Patterned Hydrogel Construct”.  Biomedical Microdevices, 9, 911-922, 2007.
 
Myung, D., Koh, W., Ko, J.,  Hu, Y., Carrasco, M., Noolandi, J., Ta, C.N., Frank, C.W. ; “Biomimetic Strain Hardening in Interpenetrating Network Hydrogels”.  Polymer [...]]]></description>
			<content:encoded><![CDATA[<p class="MsoNormal">Myung, D., Koh, W., Bakri, A., et al; “Design and Fabrication of an Artificial Cornea Based on a Photolithographically Patterned Hydrogel Construct”.  Biomedical Microdevices, <u>9</u>, 911-922, <strong>2007</strong>.</p>
<p class="MsoNormal"><strong> </strong></p>
<p class="MsoNormal">Myung, D., Koh, W., Ko, J.,  Hu, Y., Carrasco, M., Noolandi, J., Ta, C.N., <strong>Frank</strong>,<strong> C.W. ;</strong> “Biomimetic Strain Hardening in Interpenetrating Network Hydrogels”.  Polymer <u>18</u>, 53776-5387, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Myung, D., Farooqui, N., Waters, D., Schaber, S., Koh, W., Carrasco, M.,  Noolandi, J., <strong>Frank</strong>, <strong>C.W., </strong>Ta, C.N.;  “Glucose-Permeable Interpenetrating Polymer Network Hydrogels for Corneal Transplant Applications:  A Pilot Study”.  Current Eye Research, <u>33</u>, 29-43, <strong>2008</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Jang, S.S., Goddard, III, W.A., Kalani, M.Y.S., Myung, D., <strong>Frank</strong>, <strong>C.W.; </strong>“Mechanical and Transport Properties of the Poly(ethylene oxide)-Poly(acrylic acid) Double Network Hydrogel from Molecular Dynamic Simulations”.  J. Physical Chemistry B, <u>111</u>, 14440-14440, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Reiser, K. M., Bratton, C., Yankelevich, D. R., <strong>Knoesen, A</strong>., Rocha-Mendoza, I., Lotz. J.; “Quantitative Analysis of Structural Disorder in  Intervertebral Disks Using Second Harmonic Generation Imaging Comparison with Morphometric Analysis”.  Journal of Biomedical Optics, <u>12</u>, 6, 064019/1-17, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
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		</item>
		<item>
		<title>Publications for 2007</title>
		<link>http://cpima.stanford.edu/publications/2008/07/10/publications-for-2007-5/</link>
		<comments>http://cpima.stanford.edu/publications/2008/07/10/publications-for-2007-5/#comments</comments>
		<pubDate>Thu, 10 Jul 2008 17:41:20 +0000</pubDate>
		<dc:creator>Christine Cervantes</dc:creator>
		
		<category><![CDATA[Partially supported by CPIMA]]></category>

		<category><![CDATA[IRG 2]]></category>

		<guid isPermaLink="false">http://cpima.stanford.edu/publications/2008/07/10/publications-for-2007-5/</guid>
		<description><![CDATA[Tanaka, M., Hermann, J., Haase, I., Fischer, M., Boxer, S.; &#8220;Frictional Drag and Electrical Manipulation of Recombinant Proteins in Polymer Supported Membranes&#8221;.  Langmuir, 23, 5638-5644, 2007.
&#160;
Chan, Y.-H., Lenz, P., Boxer, S.; &#8220;Kinetics of DNA-Mediated Docking Reactions between Vesicles Tethered to Supported Lipid Bilayers&#8221;.  Proceedings of the National  Academy of Sciences, 104, 18913-18918, [...]]]></description>
			<content:encoded><![CDATA[<p class="MsoNormal">Tanaka, M., Hermann, J., Haase, I., Fischer, M., <strong>Boxer, S</strong>.;<em> </em>&#8220;Frictional Drag and Electrical Manipulation of Recombinant Proteins in Polymer Supported Membranes&#8221;.  Langmuir,<strong> </strong><u>23</u>, 5638-5644, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Chan, Y.-H., Lenz, P., <strong>Boxer, S.</strong>; &#8220;Kinetics of DNA-Mediated Docking Reactions between Vesicles Tethered to Supported Lipid Bilayers&#8221;.  Proceedings of the National  Academy of Sciences,<strong> </strong><u>104</u>, 18913-18918, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">ChanY.-H., <strong>Boxer,S.</strong> <em> </em>&#8220;Model Membrane Systems and their Applications&#8221;.  Current Opinion in Chemical Biology, <u>11,</u> 581-587, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Lin, W-C., Blanchette, C. D., <strong>Longo, M.L</strong>.; “Fluid-Phase Chain Unsaturation Controlling Domain Microstructure and Phase in Ternary Lipid Bilayers Containing GalCer and Cholesterol”.  Biophysical Journal, <u>92</u>, 2831-2841, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Blanchette, C. D., Lin, W-C., Orme, C. A., Ratto, T. V., <strong>Longo, M. L.</strong>, “Using Nucleation Rates to Determine Interfacial Line Tension of Symmetric and Asymmetric Lipid Bilayer Domains”. Langmuir, <u>23</u>, 5875-5877, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Blanchette, C. D., Orme, C. A., Ratto, T. V., <strong>Longo, M. L.</strong>; “Quantifying Growth of Symmetric and Asymmetric Lipid Bilayer Domains”.  Molecular and Surface Forces, Langmuir Special Issue, <u>24</u>, 1219-1224, <strong>2008</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Blanchette, C. D., Lin, W-C., Orme, C. A., Ratto, T. V, <strong>Longo, M. L.</strong>, “Domain Nucleation Rates and Interfacial Line Tensions in Supported Bilayers of Ternary Mixtures Containing Galactosylceramide”.  Biophysical Journal, <u>94</u>, 2691–2697, <strong>2008</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Kasson, P., <strong>Pande, V. S</strong>.; “Predicting Structure and Dynamics of Loosely-Ordered Protein Complexes: Influenza Hemagglutinin Fusion Peptide.”  Pacific Symposium on Biocomputing, <u>12</u>, 40-50, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Teclemariam, N.P., Beck, V.A., <strong>Shaqfeh, E.S.G., Muller, S.J.</strong>; “Dynamics of DNA Polymers in Post Arrays: Comparison of Single Molecule Experiments and Simulations”.  Macromolecules, <u>40</u>, 3848-3859, <strong>2007</strong><em>.</em></p>
<p class="MsoNormal"><em> </em></p>
<p class="MsoNormal">Lueth, C.A., <strong>Shaqfeh</strong>, <strong>E.S.G., </strong>“Tethered DNA Shear Dynamics in the Flow Gradient Plane: Application to Double Tethering”.  Korea-Australia J. Rheol., <u>19</u>, 3, 141-146, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Beck, V.A.,<strong> Shaqfeh</strong>, <strong>E.S.G.,</strong> “Ergodicity-Breaking and the Unravelling Dynamics of a Polymer in Linear and Non-Linear Extensional Flows”.  J. Rheol., <u>51</u>, 3, 561-574, May/June, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Hoffman, B., <strong>Shaqfeh</strong>, <strong>E.S.G., </strong>“The Dynamics of the Coil-Stretch Transition for Long, Flexible Polymers in Planar  Mixed Flows&#8221;.  J. Rheol., <u>51</u>, 5, 947-969, <strong>2007</strong> (see also Virtual Journal of Biological Physics Research September  1, <strong>2007</strong>.)</p>
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		</item>
		<item>
		<title>Publications for 2007</title>
		<link>http://cpima.stanford.edu/publications/2008/07/10/publications-for-2007-4/</link>
		<comments>http://cpima.stanford.edu/publications/2008/07/10/publications-for-2007-4/#comments</comments>
		<pubDate>Thu, 10 Jul 2008 17:41:09 +0000</pubDate>
		<dc:creator>Christine Cervantes</dc:creator>
		
		<category><![CDATA[Partially supported by CPIMA]]></category>

		<category><![CDATA[IRG 3]]></category>

		<guid isPermaLink="false">http://cpima.stanford.edu/publications/2008/07/10/publications-for-2007-4/</guid>
		<description><![CDATA[Shin, T.J., Yang, H., Ling, M.M., Locklin, J., Yang, L., Lee, B., Roberts, M.E., Mallik, A., Bao, Z.; “Tunable Thin-Film Crystalline Structures and Field-Effect Mobility of Oligofluorene–Thiophene Derivatives”.  Chem. Mater., 19, 5882-5889, 2007.
 
Mannsfeld, S.C.B., Briseno, A., Liu, S., Reese, C., Roberts, M.E., Bao, Z.; “Selective Nucleation of Organic Single Crystals on Nanoscopically Rough [...]]]></description>
			<content:encoded><![CDATA[<p class="MsoNormal">Shin, T.J., Yang, H., Ling, M.M., Locklin, J., Yang, L., Lee, B., Roberts, M.E., Mallik, A.,<strong> Bao</strong>, <strong>Z.</strong>; “Tunable Thin-Film Crystalline Structures and Field-Effect Mobility of Oligofluorene–Thiophene Derivatives”.  Chem. Mater., <u>19,</u> 5882-5889, <strong>2007</strong>.</p>
<p class="MsoNormal"><strong><em> </em></strong></p>
<p class="MsoNormal">Mannsfeld, S.C.B., Briseno, A., Liu, S., Reese, C., Roberts, M.E., <strong>Bao, Z.;</strong> “Selective Nucleation of Organic Single Crystals on Nanoscopically Rough Surfaces”.   Adv. Func. Mater. <u>19</u>, 3545-3553,<strong> 2007</strong>.</p>
<p class="MsoNormal"><em> </em></p>
<p class="MsoNormal">Mallik, A.B., Locklin, J.J., Mannsfeld, S., Reese, C., Roberts, M., Senatore, M., Zi, H., <strong>Bao, Z.</strong>; “Design, Synthesis, and Transistor Performance of Organic Semiconductors” in “Organic Thin Film Transistors”.  Z. Bao and J.J. Locklin Eds, CRC Press, <strong>2007</strong>.</p>
<p class="ListParagraph">&nbsp;</p>
<p class="MsoNormal">Riposan, A., Li, Y., Tan, Y. H., <strong>Galli, G.</strong>, <strong>Liu, G.</strong>; “Structural Characterization of Aldehyde-Terminated Self-Assembled Monolayers”.  J. Phys. Chem. A, <u>111</u>, 12727, <strong>2007.</strong></p>
<p class="ListParagraph">&nbsp;</p>
<p class="MsoNormal">Liu, M.; Amro, N.; <strong>Liu, G.-Y.</strong>; “Nanografting for Surface Physical Chemistry”.  Annul Review of Physical Chemistry<em>,</em> <u>59</u>, 367-386<em>,</em> <strong>2008.</strong></p>
<p class="MsoNormal"><strong> </strong></p>
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		</item>
		<item>
		<title>Publications for 2007</title>
		<link>http://cpima.stanford.edu/publications/2008/07/10/publications-for-2007-3/</link>
		<comments>http://cpima.stanford.edu/publications/2008/07/10/publications-for-2007-3/#comments</comments>
		<pubDate>Thu, 10 Jul 2008 17:41:00 +0000</pubDate>
		<dc:creator>Christine Cervantes</dc:creator>
		
		<category><![CDATA[Supported by CPIMA's Shared Facilities]]></category>

		<category><![CDATA[IRG 3]]></category>

		<guid isPermaLink="false">http://cpima.stanford.edu/publications/2008/07/10/publications-for-2007-3/</guid>
		<description><![CDATA[Yuan, Q., Mannsfeld, S. C. B., Tang, M., Toney, M. F., Luning, J., Bao, Z.; “Thin Film Structure of Tetraceno[2,3-b]thiophene Characterized by Grazing Incidence X-ray Scattering and Near-Edge X-ray Absorption Fine Structure Analysis”.  J. Am. Chem. Soc., 130, 3502-358, 2008.
Liu, S., Mannsfeld, S. C. B., LeMieux, M. C. H., Lee, W., Bao, Z.; “Organic [...]]]></description>
			<content:encoded><![CDATA[<p class="MsoNormal">Yuan, Q., Mannsfeld, S. C. B., Tang, M., Toney, M. F., Luning, J., <strong>Bao, Z.</strong>; “Thin Film Structure of Tetraceno[2,3-b]thiophene Characterized by Grazing Incidence X-ray Scattering and Near-Edge X-ray Absorption Fine Structure Analysis”.  J. Am. Chem. Soc., <u>130</u>, 3502-358, <strong>2008</strong>.</p>
<p class="MsoNormal">Liu, S., Mannsfeld, S. C. B., LeMieux, M. C. H., Lee, W., <strong>Bao, Z.</strong>; “Organic Semiconductor-Carbon Nanotube Bundle Bilayer Field Effect Transistors with Enhanced Mobilities and High On/Off Ratios”.  Appl. Phys. Lett., <u>92</u>, 053306, <strong>2008</strong>.</p>
<p class="MsoNormal">Oh, J. H., Schmidt, R., Liu, S., Würthner, F., <strong>Bao, Z.</strong>;<em> “</em>Air-Stable <em>n</em>-Channel Organic Thin-Film Transistors With High Field-Effect Mobility Based on <em>N</em>,<em>N</em>¢-bis(heptafluorobutyl)-3,4:9,10-Perylene Diimide”.  Appl. Phys. Lett.<strong> </strong><u>91</u>, 07, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Ling, M. M., Erk, P., Gomez, M., Koenemann, M., Locklin, J., <strong>Bao, Z</strong>.; “Air-Stable n-Channel Organic Semiconductors Base on Perylene Diimide Derivatives Without Strong Electron Withdrawing Groups”.  Adv. Mater.<strong>, </strong><u>19</u>, 1123-1127, <strong>2007.</strong></p>
<p class="MsoNormal"><em> </em></p>
<p class="MsoNormal">Ling, M. M., <strong>Bao, Z</strong>.; “Complementary Inverter Using High Mobility Air-Stable Perylene Diimide Derivatives”.  Appl. Phys. Lett.<strong>, </strong><u>90</u>, 093508, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Liu, S., Briseno, A., Mannsfeld, S. C. B., Locklin, J., You, W., Lee, H., Xia, Y., <strong>Bao</strong>,<strong> Z.</strong>; “Selective Crystallization of Organic Semiconductors on Patterned Templates of Carbon Nanotubes”.  Adv. Func. Mater. <u>17</u>, 2891-2896, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Reese, C., <strong>Bao, Z.</strong>; “High Angular Resolution Measurement of the Anisotropy of Charge Transport in Single Crystals”.  Adv. Mater. <u>19</u>, 4535-4538, <strong>2007</strong>. (Featured in Materials View).</p>
<p class="MsoNormal"><em> </em></p>
<p class="MsoNormal">Liu, S., Wang, W., Mannsfeld, S. C. B., Locklin, J., Erk, P., Gomez, M., Richer, F., <strong>Bao, Z</strong>.; “Solution-Assisted Assembly of Organic Semiconducting Single Crystals on Surfaces with Patterned Wettability”.  Langmuir, <u>23</u>, 7428-7432, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Fujiwara, T, Locklin J, <strong>Bao,</strong><strong> Z</strong>.; “<a href="http://apps.isiknowledge.com/WoS/CIW.cgi?SID=4E4i@h7PbGJBpPfKBOL&amp;Func=Abstract&amp;doc=1/1">Solution Deposited Liquid Crystalline Semiconductors on a Photoalignment Layer for Organic Thin-Film Transistors</a>”.  Appl. Phys. Lett. <u>90</u>, 232108, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Schmidt, R., Ling, M.M., Oh, J.H. Winkler, M.; Könemann, M., <strong>Bao, Z</strong>., Würthner<em>,</em> F.;<em> “</em>Core-Fluorinated Perylene Bisimide Dyes: Air Stable <em>n</em>-Channel Organic Semiconductors for Thin Film Transistors with Exceptionally High on-to-Off Current Ratios”.  Adv. Mater. <u>19</u>, 3692-3695,<strong> 2007</strong>.</p>
<p class="MsoNormal"><em> </em></p>
<p class="MsoNormal">Ling, M.M., Reese, C., Briseno, A. L., <strong>Bao, Z.</strong>; “Probing the Anisotropy of Charge Carrier Mobility in the Tetracene Single Crystal”.  Syn. Met., <u>157</u>, 257-260, <strong>2007</strong>.</p>
<p class="MsoNormal"><em> </em></p>
<p class="MsoNormal">Sung, A., Ling, M.M., Tang, M.L., <strong>Bao, Z.</strong>, Locklin, J.; “Correlating Molecular Structure to Field-Effect Mobility: The Investigation of Side-Chain Functionality in Phenylene - Thiophene Oligomers and Their Application in Field Effect Transistors”. <strong> </strong>Chem. Mater. <u>19</u>, 2342-2351, <strong>2007</strong>.</p>
<p class="MsoNormal"><em> </em></p>
<p class="MsoNormal">Okamoto, T., Senatore, M.L., Ling, M.M., Mallik, A.B., Tang, M.L., <strong>Bao, Z</strong>.; “Synthesis, Characterization, and Thin Film Transistor Performance of Pentacene Derivatives”.  Adv. Mater., <u>19</u>, 3381-3384, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Chen, H.Z., Ling, M.M., Mo, X., Shi, M.M., <strong>Bao, Z</strong>.; “Air Stable <em>n</em>-Channel Organic Semiconductors for Thin Film Transistors Based on Fluorinated Derivatives of Perylene Diimides”.  Chem. Mater., <u>19</u>, 816-824, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Reese, C., <strong>Bao</strong>,<strong> Z.;</strong> “<a href="http://apps.isiknowledge.com/WoS/CIW.cgi?SID=4E4i@h7PbGJBpPfKBOL&amp;Func=Abstract&amp;doc=1/8">Organic Single-Crystal Field-Effect Transistors</a>”.  Mater. Today, <u>10,</u> 20-27, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Cho,  N.J., Cheong, K.H., Lee, C.H., <strong>Frank</strong>, <strong>C.W., </strong>Glenn, J.S.; “Binding Dynamics of Hepatitus C. Virus’ NS5A Amphipathic Peptide to Cell and Model Membranes”.  Journal of Virology, <u>81</u>, 6682-6689, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Cho,  N.J., Cho, S.J., Cheong, K.H., Glenn, J.S., <strong>Frank</strong>, <strong>C.W.; </strong>“Employing an Amphipathic Viral Peptide to Create a Lipid Bilayer on Au and TiO2”.  J. American Chemical Society, <u>129</u>, 10050-10051, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Cho, N.J., Kanazawa, K.K., Glenn, J.S., <strong>Frank</strong>,<strong> C.W.;</strong> “Employing Two Different Quartz Crystal Microbalance Models to Study Changes in Viscoelastic Behavior Upon Transformation of Lipid Vesicles to a Bilayer on a Gold Surface”.  Analytical Chemistry, <u>79</u>, 7027-7035, <strong>2007</strong>.</p>
<p class="MsoNormal">Cho,  N.J., Cho, S.J., Hardesty, J.O., Glenn, J.S., <strong>Frank</strong>,<strong> C.W.;</strong> “Creation of Lipid Partitions by Deposition of Amphipathic Viral Peptides”.  Langmuir, <u>23</u>, 10855-10863, <strong>2007</strong>.</p>
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		</item>
		<item>
		<title>Publications for 2007</title>
		<link>http://cpima.stanford.edu/publications/2008/07/10/publications-for-2007-2/</link>
		<comments>http://cpima.stanford.edu/publications/2008/07/10/publications-for-2007-2/#comments</comments>
		<pubDate>Thu, 10 Jul 2008 17:33:37 +0000</pubDate>
		<dc:creator>Christine Cervantes</dc:creator>
		
		<category><![CDATA[IRG 3]]></category>

		<category><![CDATA[Primarily supported by CPIMA]]></category>

		<guid isPermaLink="false">http://cpima.stanford.edu/publications/2008/07/10/publications-for-2007-2/</guid>
		<description><![CDATA[Sly, J.; Bonifacio, C. S.; Chang, L.; Glab, K. L.; Lee, V. Y.; McNeil, M.; Jefferson, C. M.; Frommer, J. E.; Risk, W. P.; Miller, R. D.;  “Reaching for the Stars:Layered Polyvalent Self-Assembly of Hyperbranched Pigment Arrays”.  PMSE Preprints, 97, 200-201, 2007.
 
 Sills, S., Unal, K.,  Bozano, L., Frommer, J., Scott, [...]]]></description>
			<content:encoded><![CDATA[<p>Sly, J.; Bonifacio, C. S.; Chang, L.; Glab, K. L.; Lee, V. Y.; McNeil, M.; Jefferson, C. M.; <strong>Frommer, J. E.</strong>; Risk, W. P.<strong>; Miller, R. D.</strong>;  “Reaching for the Stars:Layered Polyvalent Self-Assembly of Hyperbranched Pigment Arrays<strong>”</strong>.  PMSE Preprints, <u>97,</u> 200-201, <strong>2007</strong>.</p>
<p class="ListParagraph"><em> </em></p>
<p> Sills, S., Unal, K.,  Bozano, L., <strong>Frommer, J.</strong>, Scott, J. C.;   &#8220;Local characterization of vapor-deposited electrode edges in thin film organic electronic devices&#8221;.  J. Vac. Sci. Technol., B <u>25</u>, 421-425, <strong>2007</strong>.</p>
<p>Riposan, A.; Li, Y.; Tan, Y.H.; <strong>Galli, G.; Liu, G.-Y.</strong> “Structural Characterization of Aldehyde–Terminated Self-Assembled Monolayers”.  J. Phys. Chem. B.,<em> </em><u>111</u>; 12727-12739,<em> </em><strong>2007</strong>.</p>
<p>Gowrishankar, V., Scully, S R., Chan, A.T., <strong>McGehee, M.D</strong>., Wang, Q., Branz, H.M.; “Exciton Harvesting, Charge Transfer, and Charge-Carrier Transport in Amorphous-Silicon Nanopillar/Polymer Hybrid Solar Cells”.  Journal of Applied Physics,<em> </em><u>103</u>, 064511, 1-8, <strong>2008</strong>.</p>
<p class="ListParagraph">&nbsp;</p>
<p>Gowrishankar, V., Scully, S.R., Chan, A.T., <strong>McGehee, M. D.</strong>, Wang, Q., Branz, H.M.; “Exciton Harvesting, Charge Transfer, and Charge-Carrier Transport in Amorphous-Silicon Nanopillar/Polymer Hybrid Solar Cells”.  Journal of Applied Physics,<em> </em><u>103,</u> 064511, 1-8, <strong>2008</strong>.</p>
<p class="ListParagraph"><em> </em></p>
<p>Sly, J.; Samuel, J. D. J.; Bonifacio, C. S.; Chang, L.; Lee, V. Y.; McNeil, M.; Risk, W. P.; Jefferson, C. M.; <strong>Miller, R. D.</strong>; “Versatile Layer-by-Layer Surface Modification using Functionalized Star-Polymers and Epitaxial Polyvalent Self-Assembly”.  PMSE Preprints, <u>96,</u> 319-320, <strong>2007.</strong></p>
<p>Kasson, P., <strong>Pande, V.S.</strong>; “Ensemble Molecular Dynamics Simulation Predicts Membrane Fusion Mechanism Controlled by Lipid Composition”.  PloS Computational Biology, <u>3</u>, e220, <strong>2007</strong>.</p>
<p>Li, Y., Lu, D., Swanson, S. A., <strong>Scott, J. C.</strong>, <strong>Galli, G.;</strong> &#8220;Microscopic Characterization of the Interface between Aromatic Isocyanides and Au(111): a First-Principles Investigation&#8221;, Phys. Chem. C <u>112</u>, 6413 <strong>2008</strong>.</p>
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		<item>
		<title>Publications for 2007</title>
		<link>http://cpima.stanford.edu/publications/2008/07/10/publications-2007/</link>
		<comments>http://cpima.stanford.edu/publications/2008/07/10/publications-2007/#comments</comments>
		<pubDate>Thu, 10 Jul 2008 17:32:53 +0000</pubDate>
		<dc:creator>Christine Cervantes</dc:creator>
		
		<category><![CDATA[IRG 2]]></category>

		<category><![CDATA[Primarily supported by CPIMA]]></category>

		<guid isPermaLink="false">http://cpima.stanford.edu/publications/2008/07/10/publications-2007/</guid>
		<description><![CDATA[ 
&#160;
Glazer, M.I., Fidanza, J.A., McGall, G.H., Trulson, M.O., Forman, J.E., Frank, C.W.; “Kinetics of Oligonucleotide Hybridization to DNA Probe Arrays on High-Capacity Porous Silica Substrates,” Biophysical Journal, 93, 1661-1676, 2007.
&#160;
Stalgren, J.J.R., Botschkova, K., Ericsson, J.-C., Frank, C.W., Knoll, W., Satija, S., Toney, M.F.; “Enrichment of Deuterium Oxide at Hydrophilic Interfaces in Aqueous Solutions,” Langmuir, [...]]]></description>
			<content:encoded><![CDATA[<p class="MsoNormal"><strong> </strong></p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Glazer, M.I., Fidanza, J.A., McGall, G.H., Trulson, M.O., Forman<strong>,</strong> J.E.,<strong> Frank</strong>,<strong> C.W.;</strong> “Kinetics of Oligonucleotide Hybridization to DNA Probe Arrays on High-Capacity Porous Silica Substrates,” Biophysical Journal, <u>93</u>, 1661-1676, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Stalgren, J.J.R., Botschkova, K., Ericsson, J.-C., <strong>Frank, C.W., Knoll</strong>, <strong>W., </strong>Satija, S., Toney, M.F.; “Enrichment of Deuterium Oxide at Hydrophilic Interfaces in Aqueous Solutions,” Langmuir,<em> </em><u>23</u>, 11943-11946, <strong>2007.</strong></p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Shen, Y., Powell, R. L., <strong>Longo, M. L</strong>.; “Interfacial and Stability Study of Microbubbles Coated with a Monostearin/Monopalmitin-Rich Food Emulsifier and PEG40 Stearate”, Journal of Colloid and Interface Science, <u>321</u>, 186–194, <strong>2008</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Lee, J.S., Dylla-Spears, R., Teclemariam, N.P., <strong>Muller, S.J.; </strong>“Microfluidic Four-Roll Mill for all Flow Types”.  Applied Physics Letters<em>, </em><u>90</u>, 074103, <strong>2007</strong><em>.</em></p>
<p class="MsoNormal"><em> </em></p>
<p class="MsoNormal"> Kasson, P., <strong>Pande, V. S.</strong>; “Ensemble Molecular Dynamics Simulation Predicts Membrane Fusion Mechanism Controlled by Lipid Composition”.  PloS Computational Biology<em>,<u> </u></em><u>3,</u><strong> </strong>220,<em> </em><strong>2007</strong></p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Kasson. P., Zomorodian, A., Park, S., Singhal, N., Guibas, L.,<strong> Pande, V. S</strong>.; “Persistent Voids: a New Structural Metric for Membrane Fusion”. Bioinformatics<strong>,</strong><u> 23,</u> 1753-9, <strong>2007.</strong></p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Lee, J.S., <strong>Shaqfeh, E.S.G., Muller, S.J.</strong>; “Dynamics of DNA Tumbling in Shear to Rotational Mixed Flows: Pathways and Periods”. Phys. Rev. E.,<em> </em><u>75</u>, 040802(R), <strong>2007</strong><em>.</em></p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Teixeira, R., Dambal, A.K., Richter, D.H., <strong>Shaqfeh</strong>, <strong>E.S.G.</strong>, Chu, S.; “The Individualistic Dynamics of Entangled DNA in Solution”.  Macromolecules, <u>40</u>, 7, 2461-2476, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
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		</item>
		<item>
		<title>Publications for 2007</title>
		<link>http://cpima.stanford.edu/publications/2008/07/10/publications-for-2007/</link>
		<comments>http://cpima.stanford.edu/publications/2008/07/10/publications-for-2007/#comments</comments>
		<pubDate>Thu, 10 Jul 2008 17:29:31 +0000</pubDate>
		<dc:creator>Christine Cervantes</dc:creator>
		
		<category><![CDATA[IRG 1]]></category>

		<category><![CDATA[Primarily supported by CPIMA]]></category>

		<guid isPermaLink="false">http://cpima.stanford.edu/publications/2008/07/10/publications-for-2007/</guid>
		<description><![CDATA[Hwang, L.Y., Götz, H., Hawker, C.J., Frank, C.W.; “Glyco-acrylate Copolymers for Bilayer Tethering on Benzophenone-modified Substrates”.  Colloids and Surfaces B:  Biointerfaces, 54, 127-135, 2007.
Rocha-Mendoza, I., Yankelevich, D. R., Wang, M., Reiser, K. M., Frank, C. W., Knoesen A.; “Sum Frequency Vibrational Spectroscopy the Molecular Origins of the Optical Second-Order Nonlinearity of Collagen”.  [...]]]></description>
			<content:encoded><![CDATA[<p class="MsoNormal">Hwang, L.Y., Götz, H., Hawker, C.J., <strong>Frank, C.W.</strong>; “Glyco-acrylate Copolymers for Bilayer Tethering on Benzophenone-modified Substrates”.  Colloids and Surfaces B:  Biointerfaces, <u>54</u>, 127-135, <strong>2007</strong>.</p>
<p class="MsoNormal">Rocha-Mendoza, I., Yankelevich, D. R., Wang, M., Reiser, K. M., <strong>Frank, C. W</strong>., <strong>Knoesen</strong> A.; “Sum Frequency Vibrational Spectroscopy the Molecular Origins of the Optical Second-Order Nonlinearity of Collagen”.  Biophysical Journal, <u>93</u>, 12, 4433-4444, <strong>2007</strong>.</p>
<p class="MsoNormal">Nederberg, F., Trang, V., Pratt, R.C., Mason, A.F., <strong>Frank, C.W., Waymouth, R.M., Hedrick, J.L.</strong>; “New Ground for Organic Catalysis:  A Ring-Opening Polymerization Approach to Hydrogels”.  Biomacromolecules,<em> </em><u>8</u>, 3294-3297, <strong>2007</strong>.</p>
<p class="MsoNormal">Choi, J., Lohmeijer, B.G.G., Pratt, R.C., Dubois, G., Hermans, T.M.,<strong> Frommer, J</strong>.; Nederberg, F.; Kim, H.C.; <strong>Waymouth, R.M.; Hedrick, J.L.</strong> &#8220;Expanding the Scope of Nanostuctures Possible from Block Copolymers: Role of Selective Deposition Solvent&#8221;.  Polymer Preprints (American Chemical Society, Division of Polymer Chemistry), <u>48</u>, 884-885, <strong>2007.</strong></p>
<p class="MsoNormal">Culkin, D. A., Jeong, W., Csihony, S., Gomez, E. D., <strong>Hedrick, J. L., Balsara, N. P., Waymouth, R. M.;</strong> “Zwitterionic Polymerization of Lactide to Cyclic Poly(lactide)s by using N-Heterocyclic Carbene Organocatalysts”.   Angew. Chem., Int. Ed., <u>46</u>, 2627-2630, <strong>2007</strong>.</p>
<p class="MsoNormal">Coulembier, O., Kiesewetter, M., Mason, A., Dubois, P., <strong>Hedrick, J. L., Waymouth, R. M</strong>.; “A Distinctive Organocatalytic Approach to Macromolecular Architectures”, Angew. Chem., Int. Ed., <u>46</u>, 4719-4721, <strong>2007</strong>.</p>
<p class="MsoNormal">Jeong, W., <strong>Hedrick, J. L., Waymouth, R. M</strong>.; &#8220;Organic Spirocyclic Initiators for the Ring-Expansion Polymerization of -Lactones&#8221;.  J. Am. Chem. Soc.<em>,</em> <u>129</u>, 8414-8415, <strong>2007</strong>.</p>
<p class="MsoNormal">Coulembier, O., Delva, X., <strong>Hedrick, J.L., Waymouth, R. M.</strong>, Dubois, P.; &#8220;Synthesis of Biomimetic Poly(hydroxybutyrate): Alkoxy- and Carboxytriazolines as Latent Ionic Initiator&#8221;.  Macromolecules, <u>40(24)</u>, 8560-856, <strong>2007</strong>.</p>
<p class="MsoNormal">Zhang, L., Nederberg, F., Messman, J.M., Pratt, R. C., <strong>Hedrick, J.L., Wade, C.G.;</strong> &#8220;Organocatalytic Stereoselective Ring-Opening Polymerization of Lactide with Dimeric Phosphazene Bases&#8221;.  J. Am. Chem. Soc., <u>129</u>, 12610-12611, <strong>2007</strong></p>
<p class="MsoNormal"><strong> </strong></p>
<p class="MsoNormal">Scholten, M D., <strong>Hedrick, J.L., Waymouth, R.M.;</strong> &#8220;Group Transfer Polymerization of Acrylates and Methacrylates Using N-Hetereocyclic Carbene Catalysts&#8221;.  Polymer Preprints (American Chemical Society, Division of Polymer Chemistry), <u>48</u>, 167-168,<strong> 2007</strong>.</p>
<p class="MsoNormal">Jeong, W., Shin, E. J., Culkin, D. A., <strong>Hedrick, J.L., Waymouth, R.M.;</strong> &#8220;N-Heterocyclic Carbene-Mediated Zwitterionic Polymerization: An Expedient Organocatalytic Route to Cyclic Polyesters&#8221;.  PMSE Preprints, <u>97</u>, 82-83, <strong>2007</strong></p>
<p class="MsoNormal">Wang, W., <strong>Knoesen, A.</strong>; “Rotation and Scale Invariant Texture Features Based on Spectral Moment Invariants”.  Journal of the Optical Society of America A, <u>24</u>, 9, 2550-2557, <strong>2007</strong>.</p>
<p>Wang, M., Reiser, K. M., <strong>Knoesen</strong>, <strong>A.;</strong> “Spectral Moment Invariant Analysis of Disorder in Polarization-Modulated Second Harmonic Generation Images Obtained from Collagen Assemblies”.  Journal of the Optical Society of America A, <u>24</u>, 11, 3573-3586, <strong>2007</strong>.</p>
<p class="MsoNormal">Kim, S.H., Nederberg, F., Pratt, R.C., Choi, J., Zhang, L., <strong>Wade, C.G., Waymouth, R.M., Hedrick, J.L.;</strong> &#8220;Effect of Stereochemistry and Sterecomplexation of Polylactides on Organosilicate Nanostructure&#8221;.  PMSE Preprints, <u>97</u>, 221-222, <strong>2007</strong>.</p>
<pre></pre>
<p class="MsoNormal">Nederberg, F., Lohmeijer, B.G.G., Leibfarth, F.; Pratt, R. C.; Choi, J.; Dove, A.P., <strong>Waymouth, R. M., Hedrick, J. L.;</strong> &#8220;Organocatalytic Ring Opening Polymerization of Trimethylene Carbonate&#8221; Biomacromolecules, <u>8</u>, 153-160, <strong>2007</strong>.</p>
<p class="MsoNormal">Zhang, L., Nederberg, F., Pratt, R. C, <strong>Waymouth, R. M., Hedrick, J. L., Wade, C. G.;</strong> &#8220;Phosphazene Bases: A New Category of Organocatalysts for the Living Ring-Opening Polymerization of Cyclic Esters&#8221;.  Macromolecules, <u>40</u>, 4154-4158, <strong>2007</strong>.</p>
<p class="MsoNormal">Kamber, N.E., Jeong, W., <strong>Waymouth, R.M</strong>., Pratt, R.C., Lohmeijer, B.G.G., <strong>Hedrick, J. L.;</strong> &#8220;Organocatalytic Ring-Opening Polymerization&#8221;.  Chem. Rev., <u>107</u>, 5813-5840, <strong>2007</strong>.</p>
<p class="MsoNormal">Pratt, R.C., Nederberg, F., Lohmeijer, B.G.G., <strong>Waymouth, R.M., Hedrick, J.L</strong>.; &#8220;Fully Degradable Functionalized Polymers: A Versatile Approach Using Ring-Opening Polymerization of Cyclic Carbonates&#8221;.  PMSE Preprints<strong>, </strong><u>96,</u> 204-205, <strong>2007</strong>.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Leibfarth, F.A., Lohmeijer, B.G.G., Nederberg, F., Pratt, R.C., Logan, J.W.; <strong>Waymouth, R.M.; Hedrick, J.L</strong>.; &#8220;Organocatalytic Ring Opening Polymerization of Cyclic Monomers: Mechanistic and Synthetic Studies&#8221;.  Polymer Preprints (American Chemical Society, Division of Polymer Chemistry), <u>48</u>, 984-985, <strong>2007</strong>.</p>
<p class="MsoNormal"><strong>Waymouth, R.M., Hedrick, J.L.</strong>, Nederberg, F., Pratt, R.C., Lohmeijer, B.G.G., Culkin, D.A., Coulembier, O., Kamber, N E., Jeong, W., Kiesewetter, M.K., Shin, E.J.; &#8220;Polyesters from Renewable Resources: Organocatalytic Strategies for Controlled Polymerization Reactions&#8221;.  Polymer Preprints (American Chemical Society, Division of Polymer Chemistry),  <u>48</u>, 812-813, <strong>2007</strong>.</p>
<p class="MsoNormal">Zhang, L., Nederberg, F., Pratt, R. C., <strong>Waymouth, R.M., Hedrick, J.L., Wade, C.G.;</strong> &#8220;Phosphazene Bases for the Organocatalytic Living Ring-Opening Polymerization of Cyclic Esters&#8221;.  Polymer Preprints (American Chemical Society, Division of Polymer Chemistry), <u>48</u>, 875-876, <strong>2007</strong>.</p>
<p class="MsoNormal">Nederberg, F.; Pratt, R. C.; Mason, A. F.; <strong>Waymouth, R. M.; Hedrick, J. L.</strong> &#8220;An Organocatalytic Route to Functional and Biodegradable Hydrogels&#8221; <em>Polymer Preprints (American Chemical Society, Division of Polymer Chemistry)</em> <strong>2007</strong>, <em>48</em>, 907-908.</p>
<p class="MsoNormal">Pratt, R.C., Nederberg, F., <strong>Waymouth, R.M., Hedrick, J.L</strong>.; &#8220;Functionalizing Polyesters and Polycarbonates: Covalent Tagging of Alcohols for Ring-Opening Polymerization&#8221;.  Polymer Preprints (American Chemical Society, Division of Polymer Chemistry), <u>48</u>, 1005-1006, <strong>2007</strong>.</p>
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		<item>
		<title>Surface imaging using passively scanning probes</title>
		<link>http://cpima.stanford.edu/publications/2007/11/01/surface-imaging-using-passively-scanning-probes/</link>
		<comments>http://cpima.stanford.edu/publications/2007/11/01/surface-imaging-using-passively-scanning-probes/#comments</comments>
		<pubDate>Thu, 01 Nov 2007 17:52:49 +0000</pubDate>
		<dc:creator>Irina Zaks</dc:creator>
		
		<category><![CDATA[Patents]]></category>

		<guid isPermaLink="false">http://cpima.stanford.edu//publications/surface-imaging-using-passively-scanning-probes/</guid>
		<description><![CDATA[Groves, J.T., Clack, N.G., Salaita, K.S., Kizer, L., &#8220;Surface imaging using passively scanning probes&#8221;
]]></description>
			<content:encoded><![CDATA[<p><strong>Groves, J.T.</strong>, Clack, N.G., Salaita, K.S., Kizer, L., &#8220;Surface imaging using passively scanning probes&#8221;</p>
]]></content:encoded>
			<wfw:commentRss>http://cpima.stanford.edu/publications/2007/11/01/surface-imaging-using-passively-scanning-probes/feed/</wfw:commentRss>
		</item>
		<item>
		<title>Large Arrays of Organic Semiconductor Single Crystals</title>
		<link>http://cpima.stanford.edu/publications/2007/11/01/large-arrays-of-organic-semiconductor-single-crystals/</link>
		<comments>http://cpima.stanford.edu/publications/2007/11/01/large-arrays-of-organic-semiconductor-single-crystals/#comments</comments>
		<pubDate>Thu, 01 Nov 2007 17:50:54 +0000</pubDate>
		<dc:creator>Irina Zaks</dc:creator>
		
		<category><![CDATA[Patents]]></category>

		<guid isPermaLink="false">http://cpima.stanford.edu//publications/large-arrays-of-organic-semiconductor-single-crystals/</guid>
		<description><![CDATA[Bao, Z., “Large Arrays of Organic Semiconductor Single Crystals”.
]]></description>
			<content:encoded><![CDATA[<p><strong>Bao, Z.</strong>, “Large Arrays of Organic Semiconductor Single Crystals”.</p>
]]></content:encoded>
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		</item>
		<item>
		<title>Crosslinked Dielectric Layer</title>
		<link>http://cpima.stanford.edu/publications/2007/11/01/crosslinked-dielectric-layer/</link>
		<comments>http://cpima.stanford.edu/publications/2007/11/01/crosslinked-dielectric-layer/#comments</comments>
		<pubDate>Thu, 01 Nov 2007 17:50:19 +0000</pubDate>
		<dc:creator>Irina Zaks</dc:creator>
		
		<category><![CDATA[Patents]]></category>

		<guid isPermaLink="false">http://cpima.stanford.edu//publications/crosslinked-dielectric-layer/</guid>
		<description><![CDATA[Bao, Z., “Crosslinked Dielectric Layer”.
]]></description>
			<content:encoded><![CDATA[<p><strong>Bao, Z.</strong>, “Crosslinked Dielectric Layer”.</p>
]]></content:encoded>
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